National Referral Laboratory

National Referral Laboratory

Tests, Specimens & Diagnostic Record

Data is current to 31st December, 2008

Alphabetical disease index

A B C D E F G H I J K L M N O P Q R S T U V W X Y Z


PEROXISOMAL DISORDERS

NOTE: Peroxisomal biogenesis and peroxisomal b-oxidation defects show remarkable overlap in both clinical phenotype and biochemical expression. Consequently, it may be necessary for a range of tests to be performed to reach a diagnosis. The names of these peroxisomal disorders are listed below, along with the tests and primary sample requirements.

Peroxisomal biogenesis disorders of the Zellweger spectrum
- includes Zellweger syndrome, neonatal adrenoleukodystrophy (ALD) and infantile Refsum disease

Available testing
(Includes links for test charges)
Specimen requirements
(Includes links for specimen collection and shipping, and for sample preparation charges [prep $])
Postnatal
diagnoses
Prenatal
diagnoses
Biochemical testing:

Testing varies depending on age of presentation and can include:

  • Very long chain fatty acids (plasma) ($)
  • Phytanic acid (plasma) ($)
  • Bile acid intermediates (plasma) ($)
  • Plasmalogens (erythrocytes) ($)
  • Dihydroxyacetonephosphate acyl transferase (DHAP-AT) ($)
  • Dihydroxyacetonephosphate alkyl synthase (DHAP-S) ($)
  • Phytanic acid oxidation ($)
  • Cellular catalase distribution ($)

EDTA blood (5-10mL) or plasma (2-5mL) for VLCFA, phytanic acid and bile acid intermediates.

VLCFA can also be performed on cultured cells (skin fibroblasts, chorionic villus or amniotic cells), tissue (fresh, frozen or fixed) or skin biopsy.

EDTA blood (5-10mL) or washed erythrocytes for plasmalogens.

Cultured cells or skin biopsy for DHAP-AT and DHAP-S studies.

(prep $)

80
.
Molecular testing:
  • Screen for 3 'common' mutations in the PEX1 gene ($ - 2 PCR)
  • Testing for known family mutation(s) ($)
DNA, EDTA blood or any tissue/source from which DNA can be extracted for mutation studies.
(prep $)
. .
Prenatal testing: ($)

Prenatal testing is available and can be performed by:

  • direct VLCFA analysis of CV tissue (TAT 1 week)
  • DHAP-AT or DHAP-S analysis of cultured CV cells or amniocytes (TAT 2-3 weeks)
  • mutation testing of DNA from CVS, whole amniotic fluid or cultured cells (TAT 1 week)
  • VLCFA analysis of cultured CV cells or amniocytes (TAT 2-3 weeks)
Note that it is very important that the laboratory is contacted prior to any prenatal testing as samples from the proband and/or parents are often required before any prenatal analysis.

Further information on prenatal testing can be obtained on the Prenatal diagnoses page.

Direct VLCFA analysis requires at least 7mg of dissected CVS (preferably 10mg).

Cultured cell analysis requires dissected CVS, whole amniotic fluid or cultured CV cells or amniocytes.

For mutation testing, we prefer to receive any of the above samples. However, testing can also be performed on DNA extracted prior to forwarding to the National Referral Laboratory.

.
88
(25 aff)

 

Other peroxisomal disorders

Disorder and available testing
(Includes links for test charges)
Specimen requirements
(Includes links for specimen collection and shipping, and for sample preparation charges [prep $])
Postnatal
diagnoses
Prenatal
diagnoses
X-linked adrenoleucodystrophy

Biochemical testing:

  • Very long chain fatty acids ($)
Mutation testing:

EDTA blood (10mL), cultured cells (skin fibroblasts, chorionic villus or amniotic cells), plasma, tissue (fresh, frozen or fixed), skin biopsy for VLCFA analysis.

DNA, EDTA blood or any tissue/source from which DNA can be extracted for mutation studies.

129
71
(20 aff)
X-linked adrenomyeloneuropathy

Biochemical testing:

  • Very long chain fatty acids ($)
Mutation testing:

EDTA blood (10mL), cultured cells (skin fibroblasts, chorionic villus or amniotic cells), plasma, tissue (fresh, frozen or fixed), skin biopsy for VLCFA analysis.

DNA, EDTA blood or any tissue/source from which DNA can be extracted for mutation studies.

44
0
Refsum's disease (adult onset)

Biochemical testing:

  • Phytanic acid ($)
  • Phytanic acid oxidation ($)

Plasma/serum, tissue (fresh, frozen or fixed) or EDTA blood (10mL) for phytanic acid analysis.

Cultured cells or skin biopsy for phytanic acid oxidation studies.

16
0
Rhizomelic chondrodysplasia punctata (RCDP)
  • Phytanic acid (plasma) ($)
  • Plasmalogens (erythrocytes) ($)
  • Dihydroxyacetonephosphate alkyl synthase (DHAP-S) ($)
  • Phytanic acid oxidation ($)
  • Screen for 3 common mutations in the PEX7 gene ($ - 2 PCR)
  • PEX7 gene mutation search ($ - standard)
  • Testing for known family mutation(s) ($)

EDTA blood (5-10mL) or plasma (2-5mL) for phytanic acid analysis.

EDTA blood (5-10mL) or washed erythrocytes for plasmalogens.

Cultured cells or skin biopsy for DHAP-S or phytanic acid oxidation studies.

DNA, EDTA blood or any tissue/source from which DNA can be extracted for mutation studies.

26
17
(2 aff)
Peroxisomal D-bifunctional protein deficiency

Testing can include:
  • Very long chain fatty acids (plasma) ($)
  • Phytanic acid (plasma) ($)
  • Bile acid intermediates (plasma) ($)
  • Plasmalogens (erythrocytes) ($) or
  • Dihydroxyacetonephosphate acyl transferase (DHAP-AT) ($) and
  • Dihydroxyacetonephosphate alkyl synthase (DHAP-S) ($)
  • Screen for two 'common' Lebanese mutations in the HSD17B4 gene ($ - 2 PCR)
  • HSD17B4 gene mutation search ($ - standard)
  • Testing for known family mutation(s) ($)

EDTA blood (5-10mL) or plasma (2-5mL) for VLCFA, phytanic acid and bile acid intermediates.

VLCFA can also be performed on cultured cells (skin fibroblasts, chorionic villus or amniotic cells), plasma, tissue (fresh, frozen or fixed) or skin biopsy.

EDTA blood (5-10mL) or washed erythrocytes for plasmalogens.

Cultured cells or skin biopsy for DHAP-AT, DHAP-S, phytanic acid oxidation or catalase studies.

DNA, EDTA blood or any tissue/source from which DNA can be extracted for mutation studies.

13
22
(10 aff)
a-Methylacyl-CoA racemase deficiency

Diagnosis obtained by a combination of:

  • Very long chain fatty acids (plasma) ($)
  • Phytanic acid + pristanic acid (plasma) ($)
  • Bile acid intermediates (plasma) ($)

Require 5-10mL of EDTA blood or 3-5mL of plasma for full analysis.

1
0
Hyperoxaluria Type I
  • This testing is no longer performed in our laboratory. Please contact laboratory for alternative testing location.
4
0
b-oxidation defects EDTA blood (10mL), plasma, cultured cells (skin fibroblasts, chorionic villus or amniotic cells), skin biopsy, frozen or fixed tissue.
4
0

Other tests available to differentiate various peroxisomal disorders

  • Pristanic acid ($)
    • EDTA blood (10mL), plasma, fresh frozen tissue
  • Pipecolic acid ($)
    • EDTA blood (10mL), plasma
Note that pristanic acid oxidation and fibroblast complementation studies are currently not available in the laboratory.


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